stream2
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Contents:
About STREAM2
Installation
API
Configuration for STREAM2
Reading
Preprocessing
Tools
Plotting
stream2.pl.pca_variance_ratio
stream2.pl.variable_genes
variable_genes()
stream2.pl.violin
stream2.pl.graph
stream2.pl.dimension_reduction
stream2.pl.stream_sc
stream2.pl.stream
Tutorials
complex structure
supervision with ordinal labels
supervision with categorical labels
multiomics
stream plots
stream2
API
stream2.pl.variable_genes
Edit on GitHub
stream2.pl.variable_genes
stream2.pl.
variable_genes
(
adata
,
show_texts
=
False
,
n_texts
=
10
,
size
=
8
,
text_size
=
10
,
fig_size
=
(4,
4)
,
save_fig
=
None
,
fig_path
=
None
,
fig_name
=
'plot_variable_genes.pdf'
,
pad
=
1.08
,
w_pad
=
None
,
h_pad
=
None
)
[source]
Plot highly variable genes.